Convenience Sample and Selection Bias
The study used a convenience sample from three specific pediatric practices with significantly lower vaccine uptake rates than the national average. This sample is not representative of the general US child population and likely introduces severe selection bias, as families choosing these practices may differ in health beliefs and behaviors.
Observational Study / Correlation vs. Causation
The authors explicitly state the study "only allowed for the calculation of unadjusted observational associations" and could not establish causality. The observed "higher ORs" (odds ratios) indicate only a correlation, making it impossible to determine if vaccination directly causes these health outcomes or if other unmeasured factors are responsible.
Lack of Control for Confounding Factors
The study failed to account for crucial demographic and health factors such as socioeconomic status, maternal education, gestational age at birth, type of birth, or duration of breastfeeding. These are known confounders influencing both health outcomes and vaccination decisions, making it impossible to isolate the effect of vaccination status.
The paper acknowledges the potential for 'healthy user bias,' where healthier children might be more likely to stay up-to-date with vaccinations, while those with health issues might delay or skip them. This bias can confound results, making observed differences appear due to vaccination when they are actually due to underlying health status or parental choices.
P-Hacking / Multiple Comparisons
The statistical analysis reported relationships as significant at p<0.05 'without correction for the number of statistical tests performed.' Running numerous tests without adjusting for multiple comparisons significantly increases the likelihood of false positives occurring purely by chance.
Lack of Vaccine Type Differentiation
The study only counted the total *number* of vaccine doses received and made no attempt to differentiate between specific types of vaccines administered. This prevents any meaningful insights into whether particular vaccines or combinations might be linked to specific health outcomes.
Small Sample Size for Certain Diagnoses
The sample size was insufficient for rigorous statistical analysis of conditions with lower prevalence, such as autism or ADD/ADHD. For asthma in females, there were only four cases in the unvaccinated group, rendering any statistical association highly unreliable.
Potential for Differential Healthcare-Seeking Behavior
The authors admit it was difficult to discern differences in healthcare-seeking behavior between vaccinated and unvaccinated families. If one group visited doctors more frequently, they would be more likely to receive diagnoses, creating a spurious association not directly related to vaccination status.